USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: COX5A_HUMAN USC-OGP 2-DE database:  COX5A_HUMAN COX5A_HUMAN General information about the entry View entry in simple text format Entry name COX5A_HUMAN Primary accession number P20674 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Cytochrome c oxidase subunit 5A, mitochondrial; AltName: Full=Cytochrome c oxidase polypeptide Va; Flags: Precursor;. Gene name Name=COX5A Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-5 {PLATELET 4-5} Homo sapiens (Human)   map experimental info   PLATELET_4-5 MAP LOCATIONS: SPOT OGP-0257: pI=4.88; Mw=15265 SPOT OGP-0258: pI=5.02; Mw=15102 Cross-references UniProtKB/Swiss-Prot P20674; COX5A_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name COX5A_HUMAN Primary accession number P20674 Secondary accession number(s) P30045 Q8TB65 Sequence was last modified on  December 16, 2008 (version 2) Annotations were last modified on  March 15, 2017 (version 158) Name and origin of the protein Description RecName: Full=Cytochrome c oxidase subunit 5A, mitochondrial; AltName: Full=Cytochrome c oxidase polypeptide Va; Flags: Precursor; Gene name Name=COX5A Encoded on Name=COX5A Keywords Acetylation; Complete proteome; Direct protein sequencing; Heme; Iron; Membrane; Metal-binding; Mitochondrion; Mitochondrion inner membrane; Phosphoprotein; Reference proteome; Transit peptide. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL M22760; AAA99220.1; -; mRNA EMBL DQ987236; ABK92283.1; -; mRNA EMBL DQ987237; ABK92284.1; -; mRNA EMBL CR407649; CAG28577.1; -; mRNA EMBL AC125435; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL CH471136; EAW99288.1; -; Genomic_DNA EMBL BC024240; AAH24240.1; -; mRNA CCDS CCDS10273.1; -; . PIR JT0342; OTHU5A; . RefSeq NP_004246.2; NM_004255.3; . UniGene Hs.401903; -; . ProteinModelPortal P20674; -; . SMR P20674; -; . BioGrid 114778; 57; . IntAct P20674; 27; . MINT MINT-1386385; -; . STRING 9606.ENSP00000317780; -; . DrugBank DB02659; Cholic Acid; . DrugBank DB04464; N-Formylmethionine; . TCDB 3.D.4.11.1; the proton-translocating cytochrome oxidase (cox) superfamily; . iPTMnet P20674; -; . PhosphoSitePlus P20674; -; . SwissPalm P20674; -; . BioMuta COX5A; -; . DMDM 218511986; -; . DOSAC-COBS-2DPAGE P20674; -; . OGP P20674; -; . SWISS-2DPAGE P20674; -; . UCD-2DPAGE P20674; -; . EPD P20674; -; . MaxQB P20674; -; . PaxDb P20674; -; . PeptideAtlas P20674; -; . PRIDE P20674; -; . TopDownProteomics P20674; -; . DNASU 9377; -; . Ensembl ENST00000322347; ENSP00000317780; ENSG00000178741; . Ensembl ENST00000564811; ENSP00000456386; ENSG00000178741; . GeneID 9377; -; . KEGG hsa:9377; -; . UCSC uc002azi.5; human; . CTD 9377; -; . DisGeNET 9377; -; . GeneCards COX5A; -; . HGNC HGNC:2267; COX5A; . HPA HPA027526; -; . MIM 603773; gene; . neXtProt NX_P20674; -; . OpenTargets ENSG00000178741; -; . PharmGKB PA26784; -; . eggNOG KOG4077; Eukaryota; . eggNOG ENOG4111MPD; LUCA; . GeneTree ENSGT00390000001424; -; . HOGENOM HOG000160656; -; . HOVERGEN HBG051088; -; . InParanoid P20674; -; . KO K02264; -; . OMA SARCYSH; -; . PhylomeDB P20674; -; . TreeFam TF105062; -; . Reactome R-HSA-5628897; TP53 Regulates Metabolic Genes; . Reactome R-HSA-611105; Respiratory electron transport; . ChiTaRS COX5A; human; . GenomeRNAi 9377; -; . PRO PR:P20674; -; . Proteomes UP000005640; Chromosome 15; . Bgee ENSG00000178741; -; . CleanEx HS_COX5A; -; . ExpressionAtlas P20674; baseline and differential; . Genevisible P20674; HS; . GO GO:0070062; C:extracellular exosome; IDA:UniProtKB; . GO GO:0005743; C:mitochondrial inner membrane; TAS:Reactome; . GO GO:0005751; C:mitochondrial respiratory chain complex IV; IBA:GO_Central; . GO GO:0043209; C:myelin sheath; IEA:Ensembl; . GO GO:0004129; F:cytochrome-c oxidase activity; IBA:GO_Central; . GO GO:0009055; F:electron carrier activity; TAS:UniProtKB; . GO GO:0046872; F:metal ion binding; IEA:UniProtKB-KW; . GO GO:0006123; P:mitochondrial electron transport; cytochrome c to oxygen; IBA:GO_Central CDD cd00923; Cyt_c_Oxidase_Va; 1; . Gene3D 1.25.40.40; -; 1; . InterPro IPR003204; Cyt_c_oxidase_su5A/6; . PANTHER PTHR14200; PTHR14200; 1; . Pfam PF02284; COX5A; 1; . SUPFAM SSF48479; SSF48479; 1; .

Gateways to other related servers

• The World-2DPAGE Constellation - Entry point to the world-wide 2-DPAGE resources.
• World-2DPAGE Repository - A public repository for gel-based proteomics data linked to protein identification published in the literature.
• World-2DPAGE Portal - A dynamic portal to query simultaneously world-wide gel-based proteomics databases.
• SWISS-2DPAGE - The Geneva Two-dimensional polyacrylamide gel electrophoresis database.
• ExPASy - The resources web server of the Swiss Institute of Bioinformatics

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